The Lossless Pipeline: Glossary

First key point. Brief Answer to questions. (FIXME)

Decisions are made via criteria functions.

Parameters are changed via batch configuration files.

Ensure the pipeline is set up on both the local and remote machine.

Remember to always pay attention to whether you are running a bash command on your local machine versus the remote computer cluster.

Co-registering data to a standard montage allows for comparison to other studies.

Co-registration occurs during the Lossless Pipeline in the s01 script based on a determined transformation matrix.

Ensure you have all the pipeline files and your data files on both the local and remote machine.

The input file for the Lossless pipeline is *_eeg.edf and the output files are *.edf, *_ll.set, *icasphere.tsv, *icaweights.tsv, *dipole.mat, *_annotations.mat, *_annotations.tsv, and *_annotations.json.

Remember to always pay attention to whether you are running a bash command on your local machine versus the remote computer cluster.